BioLT

Workflow Notes

Step-by-step workflows for everyday lab prep

BioLT is not only a calculator directory. These workflow pages connect several tools into a single experiment sequence so users can understand where each calculation fits in practice.

The workflow library currently includes 12 practical sequences covering quantification, PCR setup, cloning, qPCR standards, cell counting, and plating decisions.

Cell culture routine

Seeding, counting, and media handling checklist

Linked tools

Cell Seeding, Hemocytometer

Open workflow

PCR and qPCR setup

Master mix balance and control planning

Linked tools

PCR/qPCR Master Mix, DNA/RNA Copy Number

Open workflow

Molecular cloning

Ligation molar ratio and dilution checks

Linked tools

Ligation Setup, Multi-Stock Mixing

Open workflow

DNA quantification to PCR setup

Move from concentration check to dilution planning and final PCR mix assembly

Linked tools

A260 Quantitation, Serial Dilution Planner, PCR/qPCR Master Mix

Open workflow

qPCR standard curve preparation

Build a standard series, document copy number assumptions, and protect replicate volume

Linked tools

DNA/RNA Copy Number, Serial Dilution Planner, PCR/qPCR Master Mix

Open workflow

Ligation to transformation sequence

Connect ligation setup to transformation plating and final efficiency review

Linked tools

Ligation Setup, Multi-Stock Mixing, Bacterial Transformation Efficiency

Open workflow

Manual count to plating plan

Use hemocytometer data to prepare a mixed suspension and seed plates consistently

Linked tools

Hemocytometer, Cell Seeding, Cell Doubling Time

Open workflow

RNA handling to qPCR interpretation

Connect RNA quality, reverse transcription, controls, and final Ct interpretation

Linked tools

qPCR Relative Quantification (ddCt), PCR/qPCR Master Mix

Open workflow

Gel check to cleanup decision

Use gel behavior to decide whether to proceed, repeat, excise, or clean up

Linked tools

Gel Loading Calculator, A260 Quantitation

Open workflow

Cell treatment plate planning

Plan seeding, treatment timing, controls, viability checks, and plate layout together

Linked tools

Cell Seeding, Hemocytometer, Cell Doubling Time

Open workflow

Buffer and media preparation workflow

Plan pH, osmolarity, supplements, labeling, and storage records before use

Linked tools

Reconstitution Helper, Multi-Stock Mixing

Open workflow

Experiment review and troubleshooting cycle

Turn calculations, controls, observations, and deviations into a reusable review loop

Linked tools

PCR/qPCR Master Mix, Serial Dilution Planner, Cell Seeding

Open workflow